Problem Sets and Solutions

Problems based on the computer exercises will be assigned on Tuesdays and will be due the following Tuesday at the beginning of class. Points will be taken from late problem sets in proportion to their lateness at the rate of one point per hour.

The molecular modeling computer lab in Cleveland can be accessed during non-class hours using your one-card. Please note that other chemistry classes may use this room; a schedule is posted on the door.

1:   Intro to PDB, RasMol		

2:   More PDB, RasMol		


3:   DeepView: Structures

4:   Mountain Day!	no problem set

5:   Homology searching, BLAST

6:   Proteins, the Web, and beyond 

7:   Active Sites and Inhibitors:HIV protease    

8:   Metalloproteins		

9:   DNA binding and Recognition

10: Membrane Proteins


11: Electron Transport Proteins 

12: Antibodies,  Viruses, etc.

********FINAL EXAM************